MRIQC: individual T1w report

Summary

Subject ID: 001_T1.
Date and time: 2018-06-27, 23:55.
MRIQC version: 0.10.6.
Workflow details:
- File has no metadata (sidecar JSON file missing or empty)

Visual reports

Zoomed-in (brain mask)

Background noise

Extracted Image Quality Metrics (IQMs)

cjv			0.4006718288076308
cnr			3.2099508072748355
efc			0.6528794506058986
fber			35.51914978027344
fwhm	avg		3.9083111542520856
fwhm	x		3.99702
fwhm	y		4.08137
fwhm	z		3.646543462756258
icvs	csf		0.24379903134074435
icvs	gm		0.43222351034449946
icvs	wm		0.32397745831475616
inu	med		1.0433368682861328
inu	range		0.4614442348480223
qi	1		0.0
qi	2		0.001307263869718804
rpve	csf		18.997105498455838
rpve	gm		10.729324725753163
rpve	wm		16.101529077565992
size	x		256
size	y		256
size	z		160
snr	csf		3.6056429835211774
snr	gm		9.55127647039997
snr	total		9.133045185520222
snr	wm		14.242216102639523
snrd	csf		9.009576346929574
snrd	gm		15.565288534936126
snrd	total		15.956547724888187
snrd	wm		23.294778292798853
spacing	x		1.0
spacing	y		1.0
spacing	z		0.9999771118164062
summary	bg	k	0.9666815495410681
summary	bg	mad	28.124231338500977
summary	bg	mean	97.37969970703125
summary	bg	median	94.56851196289062
summary	bg	n	3466165.0
summary	bg	p05	54.52090835571289
summary	bg	p95	149.55685119628902
summary	bg	stdv	29.350839614868164
summary	csf	k	-0.09704586907542678
summary	csf	mad	110.5440902709961
summary	csf	mean	382.9725646972656
summary	csf	median	386.7704772949219
summary	csf	n	50361.0
summary	csf	p05	202.96156311035156
summary	csf	p95	553.2340698242188
summary	csf	stdv	107.26703643798828
summary	gm	k	0.23843753618923635
summary	gm	mad	67.03507995605469
summary	gm	mean	670.8532104492188
summary	gm	median	668.199462890625
summary	gm	n	26572.0
summary	gm	p05	560.0460632324218
summary	gm	p95	791.7539123535155
summary	gm	stdv	69.9578628540039
summary	wm	k	3.373723450562606
summary	wm	mad	65.91499328613281
summary	wm	mean	1001.6892700195312
summary	wm	median	1000.017333984375
summary	wm	n	186455.0
summary	wm	p05	890.8887145996093
summary	wm	p95	1116.2399536132812
summary	wm	stdv	70.2148208618164
tpm	overlap	csf	0.19750288128852844
tpm	overlap	gm	0.5048093795776367
tpm	overlap	wm	0.5199251770973206
wm2max			0.6708364728212767

Provenance information

md5sum	84ca981d20dcadf3eb0bde26033081ce
software	mriqc
version	0.10.6

Rate Image

Rating	Count
Invalid
Exclude
Usable
Good

For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.